Code: Alles auswählen
data <- read.csv("../datasets/heatmaps_in_r.csv", comment.char="#")
mat_data <- data.matrix(data[,2:ncol(data)]) # transform column 2-5 into a matrix
rownames(mat_data) <- rnames
rownames(mat_data) <- c("Cacna1aa","Cacna1ba","Cacna1c","Cacna1da","Cacna1e","Cacna1f","Cacna1g","Cacna1i","Cacna1haa","Cacna1hab","Cacna1sa","Scn1a","Scn1lab","Scn4aa","Scn4ab","Scn8aa","Scn8ab") # assign row names
Code: Alles auswählen
> sessionInfo()
R version 3.3.2 (2016-10-31)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows >= 8 x64 (build 9200)
locale:
[1] LC_COLLATE=German_Germany.1252 LC_CTYPE=German_Germany.1252 LC_MONETARY=German_Germany.1252
[4] LC_NUMERIC=C LC_TIME=German_Germany.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] gplots_3.0.1 readr_1.0.0
loaded via a namespace (and not attached):
[1] R6_2.2.0 assertthat_0.1 tools_3.3.2 tibble_1.2 Rcpp_0.12.8
[6] KernSmooth_2.23-15 gdata_2.17.0 caTools_1.17.1 bitops_1.0-6 gtools_3.5.0